BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D01SP1|AL429886
(866 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig237 849 0.0
3x_Contig317 656 0.0
>3x_Contig237
Length = 1621
Score = 849 bits (422), Expect = 0.0
Identities = 447/454 (98%), Gaps = 3/454 (0%)
Strand = Plus / Plus
Query: 413 tctgaggwaccagtcacatttccgtatgtggacagtgttcttgawagataagtattcgat 472
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 tctgaggaaccagtcacatttccgtatgtggacagtgttcttgaaagataagtattcgat 60
Query: 473 tgcctcatatgcagaagatttagatactaatggcgaatacgagatgaggaaagtgattag 532
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 -gcctcatatgcagaagatttagatactaatggcgaatacgagatgaggaaagtgattag 119
Query: 533 aagtggaatcacatatgaaaacttgggggtaggataatacacattgagacaaaaacggtg 592
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aagtggaatcaca-atgaaaacttgggggtaggataatacacattgagacaaaaacggtg 178
Query: 593 gaaaccggactttaatgaacatgtctgtdacttaaagaaacgaggaaaccaatggaaatg 652
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 179 gaaaccggactttaatgaacatgtctgtaacttaaagaaacgaggaaaccaatggaaatg 238
Query: 653 tgctaagacataaaatattgaaacgaagagcagcagagaaatagagagacagaaatgata 712
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgctaagaca-aaaatattgaaacgaagagcagcagagaaatagagagacagaaatgata 297
Query: 713 tkgtgaaaaaaagcgcagacctaaagggataagagaaccataggccttgttccaatcgac 772
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tggtgaaaaaaagcgcagacctaaagggataagagaaccataggccttgttccaatcgac 357
Query: 773 ttagtcccaaatgtcgatgatcttcacgagaaaaaatatttcggagaaggagcgataagg 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttagtcccaaatgtcgatgatcttcacgagaaaaaatatttcggagaaggagcgataagg 417
Query: 833 tagtttgtttctttctttttccttcttcaatatt 866
||||||||||||||||||||||||||||||||||
Sbjct: 418 tagtttgtttctttctttttccttcttcaatatt 451
>3x_Contig317
Length = 1025
Score = 656 bits (326), Expect = 0.0
Identities = 354/372 (95%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 4 cattggtgaagatataaaaattcgattgatttctaatcttattcatctyctcawcgtttt 63
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 371 cattggtgaagatataaaaattcgattgatttctaatcttattcatctcctcaacgtttt 312
Query: 64 gacttaggtgcgatgaaatgacatcatttttatyyyactgtgayataatagtaaacgata 123
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 311 gacttaggtgcgatgaaatgacatcatttttatcccactgtgacataatagtaaacgata 252
Query: 124 gtcgatttgcaaaggaaacaygtccattgacctttayyagttcttggaacaagaacatag 183
|||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||
Sbjct: 251 gtcgatttgcaaaggaaacacgtccattgacctttaccagtccttggaacaagaacatag 192
Query: 184 gaatcttatgcwaattgycgttgacagtcgccattggtgatctgtcgttacgyaatagat 243
||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 191 gaatcttatgcaaattgccgttgacagtcgccattggtgatctgtcgttacgcaatagat 132
Query: 244 caatatcgttattccaaaggtcgaaaggtgaatgtaaaatgacgtygtctgaratgttat 303
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 131 caatatcgttattccaaaggtcgaaaggtgaatgtaaaatgacgtcgtctgaaatgttat 72
Query: 304 gcatgattttcgcttgtgcagcaagcgagtcttataagarttgactttgataatgcgtta 363
||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 71 gcatgattttcgcttgtgcagcaagcgagtc-tataagaaatgactttgataatgcgtta 13
Query: 364 gacccatcatct 375
||||||||||||
Sbjct: 12 gacccatcatct 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6035
Number of Sequences: 1807
Number of extensions: 6035
Number of successful extensions: 153
Number of sequences better than 1.0e-20: 2
length of query: 866
length of database: 10,358,551
effective HSP length: 16
effective length of query: 850
effective length of database: 10,329,639
effective search space: 8780193150
effective search space used: 8780193150
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)